STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67945.1Putative HAD superfamily hydrolase; PFAM: haloacid dehalogenase-like hydrolase. (500 aa)    
Predicted Functional Partners:
AEV67941.1
Hypothetical protein.
 
    0.960
AEV67942.1
Glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase).
 
    0.956
AEV67943.1
Putative membrane-associated, metal-dependent hydrolase; PFAM: Sulfatase.
 
    0.956
AEV67944.1
Fe-S oxidoreductase, coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region.
 
  
 0.956
AEV70443.1
Dockerin-like protein; PFAM: Glycosyl hydrolase family 48; Dockerin type I repeat.
  
    0.526
AEV69231.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme.
  
  
 0.504
AEV70589.1
Cellobiohydrolase A (1,4-beta-cellobiosidase A); PFAM: Cellulose binding domain; Cohesin domain; manually curated.
  
     0.471
AEV67271.1
PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
  
 0.455
AEV69573.1
PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Glycosyl hydrolase family 48.
  
    0.429
AEV67442.1
PFAM: Methyltransferase domain; TIGRFAM: 3' terminal RNA ribose 2'-O-methyltransferase Hen1.
 
    0.405
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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