STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67948.1Subtilisin-like serine protease; PFAM: S-layer homology domain; Subtilase family. (484 aa)    
Predicted Functional Partners:
nifH
Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
      
 0.870
nifH-2
Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
      
 0.870
nifH-3
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
      
 0.870
AEV67950.1
Endoglucanase-like protein; PFAM: Dockerin type I repeat.
      
 0.827
AEV68470.1
PFAM: Dockerin type I repeat; Rare lipoprotein A (RlpA)-like double-psi beta-barrel; manually curated.
      
 0.827
AEV69763.1
PFAM: Copper amine oxidase N-terminal domain; Regulator of chromosome condensation (RCC1) repeat.
 
 
 0.597
AEV67576.1
PFAM: Copper amine oxidase N-terminal domain.
  
 
 0.593
AEV67046.1
Putative S-layer protein; PFAM: S-layer homology domain.
  
 
 0.570
AEV67415.1
Hypothetical protein.
 
 
 
 0.539
AEV68644.1
RCC1 domain-containing protein, alpha-tubulin suppressor; PFAM: Regulator of chromosome condensation (RCC1) repeat; Dockerin type I repeat.
 
 
 
 0.539
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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