STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67999.1PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain. (367 aa)    
Predicted Functional Partners:
AEV69385.1
Putative S-layer protein; PFAM: S-layer homology domain.
  
     0.633
AEV67033.1
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; PFAM: Glycosyl transferase family 4.
 
  
 0.631
AEV69806.1
Putative S-layer protein; PFAM: Cohesin domain; S-layer homology domain; manually curated.
  
     0.577
AEV67140.1
Exopolysaccharide biosynthesis protein, WecB/TagA/CpsF family; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
 
   
 0.575
AEV67046.1
Putative S-layer protein; PFAM: S-layer homology domain.
  
     0.571
AEV69807.1
Putative S-layer protein; PFAM: Cohesin domain; S-layer homology domain; manually curated.
  
     0.555
AEV67721.1
Beta-propeller domain-containing protein, methanol dehydrogenase; PFAM: S-layer homology domain.
  
     0.547
AEV69123.1
Putative S-layer protein; PFAM: S-layer homology domain.
  
     0.528
AEV67327.1
Putative S-layer protein; PFAM: S-layer homology domain; manually curated.
  
     0.501
AEV69833.1
Putative S-layer protein; PFAM: Cohesin domain; S-layer homology domain.
  
     0.497
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.