STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68022.1Secreted protein with C-terminal beta-propeller domain; PFAM: Beta propeller domain; manually curated. (999 aa)    
Predicted Functional Partners:
AEV68021.1
PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.807
AEV68020.1
Hypothetical protein; PFAM: Uncharacterized ACR (DUF711).
       0.443
AEV68019.1
ACT domain-containing protein; PFAM: ACT domain; Belongs to the UPF0237 family.
       0.432
AEV68023.1
ABC-type uncharacterized transport system, permease component; PFAM: Protein of unknown function (DUF990).
       0.424
AEV68024.1
ABC-type uncharacterized transport system, permease component; PFAM: Protein of unknown function (DUF990).
       0.424
AEV68025.1
ABC-type uncharacterized transport system, ATPase component; PFAM: ABC transporter.
       0.424
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.