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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68023.1ABC-type uncharacterized transport system, permease component; PFAM: Protein of unknown function (DUF990). (273 aa)    
Predicted Functional Partners:
AEV68025.1
ABC-type uncharacterized transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.978
AEV68024.1
ABC-type uncharacterized transport system, permease component; PFAM: Protein of unknown function (DUF990).
 
  
 0.971
AEV68097.1
PFAM: Protein of unknown function DUF58.
  
     0.571
AEV68271.1
PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region.
  
     0.557
AEV69809.1
PFAM: Cellulose binding domain; Cohesin domain.
  
     0.557
AEV68228.1
PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region.
  
     0.551
AEV68267.1
PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region.
  
     0.535
AEV68274.1
PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region.
  
     0.520
AEV68239.1
PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region.
  
     0.515
AEV67903.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Domain of unknown function (DUF3502); Bacterial extracellular solute-binding protein.
  
     0.502
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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