STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68025.1ABC-type uncharacterized transport system, ATPase component; PFAM: ABC transporter. (323 aa)    
Predicted Functional Partners:
AEV68023.1
ABC-type uncharacterized transport system, permease component; PFAM: Protein of unknown function (DUF990).
 
  
 0.978
AEV68024.1
ABC-type uncharacterized transport system, permease component; PFAM: Protein of unknown function (DUF990).
 
  
 0.972
AEV68648.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
   
0.544
AEV68228.1
PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region.
  
     0.521
AEV68271.1
PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region.
  
     0.518
AEV69231.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme.
 
     0.512
ecfA-2
ABC-type cobalt transport system, ATPase component; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
     
0.494
AEV68261.1
PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region.
  
     0.478
AEV68274.1
PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region.
  
     0.467
AEV68267.1
PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region.
  
     0.464
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.