STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68074.1PFAM: Carbohydrate binding domain (family 25). (108 aa)    
Predicted Functional Partners:
AEV68875.1
Glycosyltransferase; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1.
  
     0.716
AEV68824.1
PFAM: Tryptophan RNA-binding attenuator protein.
  
     0.686
AEV68458.1
PFAM: HutP.
  
     0.681
AEV70552.1
Hypothetical protein.
  
     0.633
AEV70642.1
Protein possibly involved in post-translational modification of quorum-sensing peptides; PFAM: Accessory gene regulator B.
  
     0.618
AEV67383.1
Putative Fe-S oxidoreductase; PFAM: Radical SAM superfamily; PDZ domain (Also known as DHR or GLGF); Protein of unknown function (DUF512).
  
     0.617
AEV67990.1
Multimeric flavodoxin WrbA; PFAM: NADPH-dependent FMN reductase; manually curated.
  
     0.585
AEV69484.1
Putative threonine efflux protein; PFAM: LysE type translocator.
  
     0.506
AEV70422.1
PFAM: YtxC-like family; TIGRFAM: putative sporulation protein YtxC.
  
     0.503
AEV67466.1
Protein possibly involved in post-translational modification of quorum-sensing peptides; PFAM: Accessory gene regulator B; manually curated.
  
     0.499
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.