STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68096.1Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily. (878 aa)    
Predicted Functional Partners:
AEV68097.1
PFAM: Protein of unknown function DUF58.
 
    0.942
AEV68098.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
  
 0.908
AEV67266.1
PFAM: Protein of unknown function DUF58.
 
    0.801
AEV70588.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
  
 0.688
AEV67267.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
  
 0.680
AEV67711.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
  
 0.629
AEV68123.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
  
 0.532
AEV70587.1
PFAM: Protein of unknown function DUF58.
 
    0.486
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
       0.459
AEV67172.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
  
 0.417
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.