Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEV68149.1PFAM: Kelch motif; RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies). (2974 aa)    
Predicted Functional Partners:
AEV68148.1
PFAM: Fibronectin type III domain.
 
    0.910
AEV68150.1
Hypothetical protein.
       0.746
AEV67440.1
Hypothetical protein.
 
     0.732
AEV69103.1
Hypothetical protein.
  
     0.722
AEV69352.1
Hypothetical protein; Manually curated.
  
 
 0.705
AEV67526.1
PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region.
 
   
 0.699
AEV67547.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: Archaeal ATPase; FtsK/SpoIIIE family.
 
     0.697
AEV67437.1
Hypothetical protein.
  
     0.679
AEV67025.1
Hypothetical protein.
  
     0.676
AEV67525.1
Hypothetical protein; Manually curated.
  
  
 0.664
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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