STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68167.1Putative phosphatase, C-terminal domain of histone macro H2A1 like protein; PFAM: Macro domain. (155 aa)    
Predicted Functional Partners:
AEV68641.1
Hypothetical protein; Manually curated.
 
   
 0.693
AEV69590.1
PFAM: GH3 auxin-responsive promoter.
 
     0.664
AEV67439.1
TROVE domain-containing protein; PFAM: TROVE domain.
  
     0.570
kptA
RNA:NAD 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
 
  
 0.566
AEV67442.1
PFAM: Methyltransferase domain; TIGRFAM: 3' terminal RNA ribose 2'-O-methyltransferase Hen1.
 
     0.559
AEV69658.1
Putative ATPase; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; NB-ARC domain.
 
   0.555
AEV69913.1
Putative homoserine kinase type II (protein kinase fold); PFAM: Domain of unknown function (DUF227).
  
    0.555
AEV68168.1
Hypothetical protein.
       0.545
AEV67649.1
Hypothetical protein.
  
     0.531
AEV68581.1
Putative thioesterase involved in non-ribosomal peptide biosynthesis; PFAM: Thioesterase domain.
  
     0.516
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.