STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68196.1Putative transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family. (124 aa)    
Predicted Functional Partners:
AEV68194.1
Hypothetical protein.
 
  
 0.980
AEV68195.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.975
AEV68327.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.552
AEV67056.1
Flagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; manually curated.
   
    0.499
AEV67169.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
  
 0.487
AEV67346.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
  
 0.487
AEV68487.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
  
 0.487
AEV69581.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
  
 0.487
AEV70030.1
PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit.
  
  
 0.487
AEV67453.1
Cytidyltransferase-related enzyme; PFAM: Cytidylyltransferase; TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type; cytidyltransferase-related domain.
   
    0.468
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.