STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68223.1PFAM: Protein of unknown function (DUF1557); Fibronectin type III domain; CARDB; TIGRFAM: intein N-terminal splicing region; intein C-terminal splicing region. (3729 aa)    
Predicted Functional Partners:
AEV68222.1
Subtilisin-like serine protease; PFAM: Subtilase family.
 
     0.822
AEV68224.1
Hypothetical protein.
       0.727
AEV68293.1
PFAM: Fibronectin type III domain.
  
     0.697
AEV68221.1
Hypothetical protein.
       0.558
AEV67173.1
PFAM: Protein of unknown function DUF58.
  
     0.553
AEV66809.1
PFAM: Protein of unknown function DUF58.
  
     0.533
AEV68124.1
PFAM: Protein of unknown function DUF58.
  
     0.451
AEV68148.1
PFAM: Fibronectin type III domain.
  
     0.434
AEV70589.1
Cellobiohydrolase A (1,4-beta-cellobiosidase A); PFAM: Cellulose binding domain; Cohesin domain; manually curated.
  
     0.418
AEV68167.1
Putative phosphatase, C-terminal domain of histone macro H2A1 like protein; PFAM: Macro domain.
  
     0.414
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.