STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68239.1PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region. (201 aa)    
Predicted Functional Partners:
AEV68240.1
Hypothetical protein.
       0.773
AEV68241.1
Hypothetical protein.
       0.732
AEV70443.1
Dockerin-like protein; PFAM: Glycosyl hydrolase family 48; Dockerin type I repeat.
  
     0.657
AEV69809.1
PFAM: Cellulose binding domain; Cohesin domain.
  
     0.649
AEV70372.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.617
AEV67797.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.612
AEV67853.1
PFAM: Cellulose binding domain.
  
     0.603
AEV68583.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.592
AEV68202.1
Cellulose binding domain-containing protein,dockerin-like protein; PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat.
  
     0.567
AEV69573.1
PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Glycosyl hydrolase family 48.
  
     0.565
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.