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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68271.1PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region. (580 aa)    
Predicted Functional Partners:
AEV68272.1
Hypothetical protein.
       0.773
AEV68273.1
Hypothetical protein.
       0.675
AEV69809.1
PFAM: Cellulose binding domain; Cohesin domain.
  
     0.599
AEV68023.1
ABC-type uncharacterized transport system, permease component; PFAM: Protein of unknown function (DUF990).
  
     0.557
AEV70443.1
Dockerin-like protein; PFAM: Glycosyl hydrolase family 48; Dockerin type I repeat.
  
     0.556
AEV70372.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.533
AEV70638.1
Cellobiohydrolase A (1,4-beta-cellobiosidase A); PFAM: Cellulose binding domain; Cohesin domain.
  
     0.533
AEV67797.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.521
AEV68025.1
ABC-type uncharacterized transport system, ATPase component; PFAM: ABC transporter.
  
     0.518
AEV68583.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.517
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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