STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68338.1Putative ABC-type transport system, periplasmic component/surface lipoprotein; PFAM: Basic membrane protein. (352 aa)    
Predicted Functional Partners:
AEV68335.1
ATPase component of uncharacterized ABC-type transporter; PFAM: ABC transporter.
 
 
 0.987
AEV68333.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.984
AEV68334.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.983
AEV69059.1
ATPase component of uncharacterized ABC-type transporter; PFAM: ABC transporter.
 
 
 0.978
AEV69057.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.973
AEV69058.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.971
AEV69060.1
Putative ABC-type transport system, periplasmic component/surface lipoprotein; PFAM: Basic membrane protein.
  
  
 
0.927
AEV68337.1
Glycine radical enzyme, YjjI family; PFAM: Protein of unknown function (DUF3029); TIGRFAM: glycine radical enzyme, YjjI family.
 
     0.707
AEV68336.1
PFAM: Radical SAM superfamily; TIGRFAM: glycine radical enzyme activase, YjjW family.
 
     0.639
deoD
PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD).
       0.593
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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