STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68360.1PFAM: TadE-like protein. (407 aa)    
Predicted Functional Partners:
AEV68359.1
Hypothetical protein; Manually curated.
       0.643
AEV67149.1
PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
  
 0.541
AEV68358.1
PFAM: TadE-like protein.
       0.486
AEV68361.1
Uncharacterized protein, possibly involved in aromatic compounds catabolism; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.
       0.477
AEV69645.1
Hypothetical protein.
  
    0.423
AEV67152.1
Flp pilus assembly protein TadC; PFAM: Bacterial type II secretion system protein F domain.
  
  
 0.422
AEV69400.1
Flp pilus assembly protein TadC; PFAM: Bacterial type II secretion system protein F domain.
  
  
 0.422
AEV67151.1
Hypothetical protein.
  
  
 0.420
AEV69401.1
Flp pilus assembly protein TadB; PFAM: Bacterial type II secretion system protein F domain.
  
  
 0.420
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.