STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68364.1PFAM: Protein of unknown function (DUF2953); manually curated. (214 aa)    
Predicted Functional Partners:
AEV68365.1
PFAM: Sporulation protein YtfJ (Spore_YtfJ).
 
    0.943
AEV68363.1
Hypothetical protein.
  
    0.907
AEV68362.1
PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.857
AEV69673.1
Hypothetical protein.
  
     0.484
AEV68366.1
Hypothetical protein.
       0.425
AEV69222.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
     0.423
AEV70248.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
     0.415
AEV68361.1
Uncharacterized protein, possibly involved in aromatic compounds catabolism; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.
       0.414
AEV69674.1
Hypothetical protein.
  
     0.413
AEV67237.1
PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit.
  
     0.406
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.