STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68410.1Hypothetical protein. (563 aa)    
Predicted Functional Partners:
AEV67067.1
PFAM: PPIC-type PPIASE domain.
  
 
 0.617
AEV69977.1
TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats.
  
     0.593
AEV70507.1
PFAM: FlgN protein.
  
     0.554
AEV70271.1
PFAM: Outer membrane efflux protein.
  
   
 0.552
AEV67210.1
PFAM: Acetyltransferase (GNAT) family.
  
     0.550
AEV66816.1
DnaD-like protein; PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain.
  
     0.543
AEV67525.1
Hypothetical protein; Manually curated.
  
  
 0.512
AEV69792.1
Dolichyl-phosphate-mannose--protein O-mannosyl transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.507
AEV70272.1
Hypothetical protein.
  
   
 0.490
AEV68435.1
Parvulin-like peptidyl-prolyl isomerase; PFAM: PPIC-type PPIASE domain.
   
 
 0.485
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.