STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68487.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (304 aa)    
Predicted Functional Partners:
AEV68486.1
Hypothetical protein.
 
 
 0.959
AEV68648.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
  
0.898
AEV68488.1
Hypothetical protein.
  
    0.797
AEV68485.1
Lysophospholipase; PFAM: alpha/beta hydrolase fold.
       0.746
AEV67347.1
Hypothetical protein.
 
 
 0.694
AEV67170.1
Hypothetical protein.
  
 
 0.643
AEV68482.1
Hypothetical protein.
 
    0.633
AEV67179.1
Hypothetical protein.
  
 
 0.612
AEV69819.1
Hypothetical protein.
  
 
 0.612
AEV68484.1
PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.587
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.