STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheDChemotaxis protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (161 aa)    
Predicted Functional Partners:
AEV68541.1
Chemotaxis protein CheC, inhibitor of MCP methylation; PFAM: CheC-like family.
 
 0.999
AEV68555.1
Flagellar motor switch protein FliN; PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliN; manually curated.
 
 
 0.998
AEV67463.1
PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.
 
  0.979
AEV67464.1
PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.
 
  0.978
AEV68185.1
PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.
 
  0.978
AEV69900.1
PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.
 
  0.978
AEV70486.1
PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; manually curated.
 
  0.978
AEV69426.1
PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.
 
  0.977
AEV67976.1
PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.
 
  0.976
AEV68388.1
PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; manually curated.
 
  0.976
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.