STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68577.1Dockerin-like protein; PFAM: Glycosyl hydrolase family 9; Dockerin type I repeat. (558 aa)    
Predicted Functional Partners:
AEV68638.1
PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; Belongs to the glycosyl hydrolase 3 family.
  
  
  0.787
AEV67086.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat.
  
 
0.786
AEV69016.1
Beta-1,4-xylanase; PFAM: Dockerin type I repeat; Glycosyl hydrolase family 10; Carbohydrate binding module (family 6); Glycosyl hydrolases family 11; Belongs to the glycosyl hydrolase 10 (cellulase F) family.
  
 
  
0.782
AEV70589.1
Cellobiohydrolase A (1,4-beta-cellobiosidase A); PFAM: Cellulose binding domain; Cohesin domain; manually curated.
 
   
 0.751
AEV67188.1
Cellobiose phosphorylase; PFAM: Glycosyltransferase family 36; Putative carbohydrate binding domain; Glycosyltransferase 36 associated family.
  
  
  0.737
AEV67052.1
Dockerin-like protein; PFAM: Dockerin type I repeat.
    
  
0.727
AEV69022.1
Enterochelin esterase-like enzyme; PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); Putative esterase.
    
  
0.727
AEV70638.1
Cellobiohydrolase A (1,4-beta-cellobiosidase A); PFAM: Cellulose binding domain; Cohesin domain.
  
   
 0.720
AEV69156.1
CBM6-containing protein; PFAM: Carbohydrate binding module (family 6); manually curated.
  
   0.711
AEV67189.1
Cellobiose phosphorylase; PFAM: Amylo-alpha-1,6-glucosidase; Glycosyltransferase family 36.
  
  
  0.701
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.