STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68680.1Beta-1,4-xylanase; PFAM: Glycosyl hydrolase family 10; Glycosyl hydrolases family 11; Belongs to the glycosyl hydrolase 11 (cellulase G) family. (660 aa)    
Predicted Functional Partners:
AEV69573.1
PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Glycosyl hydrolase family 48.
  
   
 0.927
AEV70592.1
CBM6-containing protein,dockerin-like protein; PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6).
 
   
 0.767
AEV67608.1
Alpha-glucuronidase; PFAM: Glycosyl hydrolase family 67 C-terminus; Glycosyl hydrolase family 67 middle domain; Glycosyl hydrolase family 67 N-terminus; Belongs to the glycosyl hydrolase 67 family.
  
     0.761
AEV66831.1
Beta-xylosidase; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
   
 0.757
AEV69156.1
CBM6-containing protein; PFAM: Carbohydrate binding module (family 6); manually curated.
  
   
 0.751
AEV69204.1
Hypothetical protein.
  
     0.735
AEV67765.1
PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.722
AEV68498.1
Lysophospholipase L1-like esterase; PFAM: Dockerin type I repeat; GDSL-like Lipase/Acylhydrolase.
 
   
 0.703
AEV67624.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase.
  
   
 0.694
sigI
RNA polymerase sigma-I factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.
      
 0.680
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.