STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68681.1PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated. (540 aa)    
Predicted Functional Partners:
AEV68682.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.501
AEV67448.1
PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated.
  
     0.492
AEV67445.1
PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated.
  
     0.489
AEV67907.1
PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated.
  
     0.489
AEV70375.1
PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated.
  
     0.489
AEV67556.1
PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated.
  
     0.485
AEV69986.1
PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated.
  
     0.485
AEV69995.1
PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated.
  
     0.485
AEV70242.1
PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated.
  
     0.484
AEV68683.1
ABC-type polysaccharide transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.478
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.