STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68684.1ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein. (559 aa)    
Predicted Functional Partners:
AEV68682.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.991
AEV68683.1
ABC-type polysaccharide transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.989
AEV67902.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.972
AEV67901.1
ABC-type polysaccharide transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.926
AEV67903.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Domain of unknown function (DUF3502); Bacterial extracellular solute-binding protein.
  
  
0.924
AEV69084.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.808
AEV67216.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter; TOBE domain.
  
 
 0.783
AEV69083.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.771
AEV69017.1
Beta-xylosidase; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.709
AEV67023.1
Beta-1,4-xylanase; PFAM: Glycosyl hydrolase family 10; Domain of unknown function (DUF1083); Carbohydrate binding domain; S-layer homology domain.
  
   
 0.693
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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