Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEV68723.1 | AEV68724.1 | Clocl_2129 | Clocl_2130 | HD domain-containing protein; PFAM: HD domain. | PFAM: Radical SAM superfamily; TIGRFAM: six-Cys-in-45 modification radical SAM protein; radical SAM additional 4Fe4S-binding domain. | 0.498 |
| AEV68723.1 | AEV68725.1 | Clocl_2129 | Clocl_2131 | HD domain-containing protein; PFAM: HD domain. | TIGRFAM: rSAM-modified six-cysteine peptide SCIFF; manually curated. | 0.411 |
| AEV68723.1 | AEV70552.1 | Clocl_2129 | Clocl_4118 | HD domain-containing protein; PFAM: HD domain. | Hypothetical protein. | 0.442 |
| AEV68723.1 | secD | Clocl_2129 | Clocl_2128 | HD domain-containing protein; PFAM: HD domain. | Protein-export membrane protein, SecD/SecF family; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.625 |
| AEV68723.1 | secF | Clocl_2129 | Clocl_2127 | HD domain-containing protein; PFAM: HD domain. | Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.625 |
| AEV68724.1 | AEV68723.1 | Clocl_2130 | Clocl_2129 | PFAM: Radical SAM superfamily; TIGRFAM: six-Cys-in-45 modification radical SAM protein; radical SAM additional 4Fe4S-binding domain. | HD domain-containing protein; PFAM: HD domain. | 0.498 |
| AEV68724.1 | AEV68725.1 | Clocl_2130 | Clocl_2131 | PFAM: Radical SAM superfamily; TIGRFAM: six-Cys-in-45 modification radical SAM protein; radical SAM additional 4Fe4S-binding domain. | TIGRFAM: rSAM-modified six-cysteine peptide SCIFF; manually curated. | 0.994 |
| AEV68724.1 | secD | Clocl_2130 | Clocl_2128 | PFAM: Radical SAM superfamily; TIGRFAM: six-Cys-in-45 modification radical SAM protein; radical SAM additional 4Fe4S-binding domain. | Protein-export membrane protein, SecD/SecF family; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.522 |
| AEV68724.1 | secF | Clocl_2130 | Clocl_2127 | PFAM: Radical SAM superfamily; TIGRFAM: six-Cys-in-45 modification radical SAM protein; radical SAM additional 4Fe4S-binding domain. | Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.440 |
| AEV68725.1 | AEV68723.1 | Clocl_2131 | Clocl_2129 | TIGRFAM: rSAM-modified six-cysteine peptide SCIFF; manually curated. | HD domain-containing protein; PFAM: HD domain. | 0.411 |
| AEV68725.1 | AEV68724.1 | Clocl_2131 | Clocl_2130 | TIGRFAM: rSAM-modified six-cysteine peptide SCIFF; manually curated. | PFAM: Radical SAM superfamily; TIGRFAM: six-Cys-in-45 modification radical SAM protein; radical SAM additional 4Fe4S-binding domain. | 0.994 |
| AEV68725.1 | secD | Clocl_2131 | Clocl_2128 | TIGRFAM: rSAM-modified six-cysteine peptide SCIFF; manually curated. | Protein-export membrane protein, SecD/SecF family; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.514 |
| AEV68725.1 | secF | Clocl_2131 | Clocl_2127 | TIGRFAM: rSAM-modified six-cysteine peptide SCIFF; manually curated. | Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.403 |
| AEV70552.1 | AEV68723.1 | Clocl_4118 | Clocl_2129 | Hypothetical protein. | HD domain-containing protein; PFAM: HD domain. | 0.442 |
| secD | AEV68723.1 | Clocl_2128 | Clocl_2129 | Protein-export membrane protein, SecD/SecF family; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | HD domain-containing protein; PFAM: HD domain. | 0.625 |
| secD | AEV68724.1 | Clocl_2128 | Clocl_2130 | Protein-export membrane protein, SecD/SecF family; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | PFAM: Radical SAM superfamily; TIGRFAM: six-Cys-in-45 modification radical SAM protein; radical SAM additional 4Fe4S-binding domain. | 0.522 |
| secD | AEV68725.1 | Clocl_2128 | Clocl_2131 | Protein-export membrane protein, SecD/SecF family; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | TIGRFAM: rSAM-modified six-cysteine peptide SCIFF; manually curated. | 0.514 |
| secD | secF | Clocl_2128 | Clocl_2127 | Protein-export membrane protein, SecD/SecF family; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.999 |
| secF | AEV68723.1 | Clocl_2127 | Clocl_2129 | Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | HD domain-containing protein; PFAM: HD domain. | 0.625 |
| secF | AEV68724.1 | Clocl_2127 | Clocl_2130 | Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | PFAM: Radical SAM superfamily; TIGRFAM: six-Cys-in-45 modification radical SAM protein; radical SAM additional 4Fe4S-binding domain. | 0.440 |
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