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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68747.1Hypothetical protein. (293 aa)    
Predicted Functional Partners:
AEV67525.1
Hypothetical protein; Manually curated.
  
     0.725
AEV67541.1
PFAM: Tetratricopeptide repeat.
  
    0.713
AEV67547.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: Archaeal ATPase; FtsK/SpoIIIE family.
  
     0.706
AEV67526.1
PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region.
  
     0.704
AEV67440.1
Hypothetical protein.
  
     0.677
AEV67546.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: FtsK/SpoIIIE family; manually curated.
  
     0.636
AEV68286.1
Hypothetical protein; PFAM: 3D domain.
  
     0.619
AEV66883.1
PFAM: Predicted membrane protein (DUF2339); manually curated.
 
     0.606
AEV68512.1
PFAM: DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
  
     0.555
AEV70629.1
Ig-like domain-containing protein,putative S-layer protein; PFAM: S-layer homology domain; Bacterial Ig-like domain (group 4).
  
     0.546
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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