STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68773.1PFAM: Protein of unknown function DUF115. (617 aa)    
Predicted Functional Partners:
AEV68408.1
PFAM: Cohesin domain.
  
     0.701
AEV70524.1
Hypothetical protein.
 
    0.687
AEV69808.1
PFAM: Cohesin domain; manually curated.
  
     0.662
AEV70635.1
Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: PGAP1-like protein; manually curated.
  
     0.605
nrdR
Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
       0.593
AEV70516.1
N-acetylneuraminate synthase; PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase.
 
  
 0.578
AEV70609.1
N-acetylneuraminate synthase; PFAM: SAF domain; NeuB family; TIGRFAM: N-acetylneuraminate synthase.
 
  
 0.577
AEV70622.1
Hypothetical protein; Manually curated.
  
  
 0.573
AEV68675.1
Hypothetical protein.
  
     0.560
AEV68857.1
PFAM: Copper amine oxidase N-terminal domain.
  
     0.541
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.