STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68807.1PFAM: ArgK protein. (102 aa)    
Predicted Functional Partners:
AEV68788.1
Hypothetical protein.
 
    
0.919
AEV68806.1
Hypothetical protein.
       0.661
AEV68805.1
Site-specific recombinase, DNA invertase Pin; PFAM: Recombinase; Resolvase, N terminal domain; manually curated.
       0.553
AEV68808.1
Hypothetical protein.
       0.490
AEV67466.1
Protein possibly involved in post-translational modification of quorum-sensing peptides; PFAM: Accessory gene regulator B; manually curated.
  
     0.457
AEV68804.1
Hypothetical protein; PFAM: Heavy-metal-associated domain; Cytochrome C biogenesis protein transmembrane region.
       0.426
AEV67342.1
PFAM: Stage II sporulation protein R (spore_II_R); TIGRFAM: stage II sporulation protein R.
  
     0.420
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.