Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEV68846.1PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (505 aa)    
Predicted Functional Partners:
AEV68847.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 0.967
AEV67239.1
PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
 
 0.955
AEV67271.1
PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
 
0.943
AEV70605.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 0.860
AEV67193.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 0.846
AEV67472.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 0.839
AEV68803.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 0.839
AEV69663.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 0.839
AEV69862.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 0.837
AEV67736.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 0.835
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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