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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68855.1Hypothetical protein. (78 aa)    
Predicted Functional Partners:
dinB-2
nucleotidyltransferase/DNA polymerase involved in DNA repair; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
 
     0.763
AEV68854.1
Hypothetical protein; PFAM: Uncharacterised ACR, COG2135; Belongs to the SOS response-associated peptidase family.
 
     0.740
AEV67437.1
Hypothetical protein.
  
     0.565
AEV67386.1
PFAM: Protein of unknown function (DUF402).
  
     0.547
AEV68937.1
Rhs family protein; PFAM: Bacterial Ig-like domain (group 2); RHS Repeat; Dockerin type I repeat; Bacterial SH3 domain; TIGRFAM: YD repeat (two copies).
  
     0.503
AEV69257.1
RHS repeat-associated core domain protein; PFAM: RHS Repeat; Protein of unknown function (DUF1557); TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies).
  
     0.499
AEV67025.1
Hypothetical protein.
  
     0.455
AEV67438.1
Hypothetical protein.
  
     0.449
AEV68857.1
PFAM: Copper amine oxidase N-terminal domain.
 
     0.448
AEV66770.1
Hypothetical protein; PFAM: Tetratricopeptide repeat; manually curated.
  
     0.441
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.