Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEV68863.1Dockerin-like protein; PFAM: Dockerin type I repeat. (288 aa)    
Predicted Functional Partners:
AEV66831.1
Beta-xylosidase; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.705
AEV69630.1
PFAM: Carbohydrate binding module (family 6); Glycosyl hydrolases family 11; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
    0.696
AEV67624.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase.
  
     0.687
AEV68695.1
PFAM: Alpha-L-arabinofuranosidase B (ABFB).
  
     0.610
AEV67436.1
Hypothetical protein.
  
     0.536
AEV67608.1
Alpha-glucuronidase; PFAM: Glycosyl hydrolase family 67 C-terminus; Glycosyl hydrolase family 67 middle domain; Glycosyl hydrolase family 67 N-terminus; Belongs to the glycosyl hydrolase 67 family.
  
     0.528
AEV68864.1
Site-specific recombinase, DNA invertase Pin; PFAM: Recombinase; Resolvase, N terminal domain.
       0.527
AEV68387.1
Uncharacterized protein containing chitin-binding domain type 3; PFAM: S-layer homology domain; PKD domain; Fibronectin type III domain.
  
     0.505
AEV68465.1
Polyketide synthase family protein; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
 
    0.426
AEV69446.1
Hypothetical protein; PFAM: Acyltransferase family; manually curated.
  
     0.423
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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