STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV68871.1Hypothetical protein; Manually curated. (320 aa)    
Predicted Functional Partners:
AEV70626.1
Putative membrane protein, required for N-linked glycosylation; PFAM: O-Antigen ligase; manually curated.
  
     0.657
AEV68667.1
PFAM: Stage III sporulation protein AF (Spore_III_AF); TIGRFAM: stage III sporulation protein AF; manually curated.
  
     0.546
AEV68545.1
Putative glycosyltransferase; PFAM: PilZ domain.
  
     0.535
AEV70535.1
PFAM: FlgN protein.
  
     0.535
AEV68975.1
TIGRFAM: putative membrane protein, TIGR04086 family; integral membrane protein, TIGR04097 family.
  
     0.533
AEV67457.1
Hypothetical protein.
  
     0.524
AEV70601.1
PFAM: YycH protein.
  
     0.518
AEV69148.1
UDP-N-acetylmuramyl tripeptide synthase; PFAM: Mur ligase middle domain; manually curated.
  
     0.511
AEV70507.1
PFAM: FlgN protein.
  
     0.506
AEV68977.1
PFAM: Peptidase propeptide and YPEB domain.
  
     0.482
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.