STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69015.1PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain. (531 aa)    
Predicted Functional Partners:
AEV69014.1
PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase.
 
  
 0.995
AEV69133.1
Ribulose-5-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
   
 
 0.906
AEV69022.1
Enterochelin esterase-like enzyme; PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); Putative esterase.
     
 0.857
AEV69010.1
Beta-1,4-xylanase; PFAM: Bacterial Ig-like domain (group 2); Glycosyl hydrolase family 10; Domain of unknown function (DUF1083).
      
 0.853
AEV69761.1
PFAM: L-fucose isomerase, C-terminal domain.
 
  
 0.717
sigI
RNA polymerase sigma-I factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.
      
 0.690
AEV69589.1
Putative beta-xylosidase; PFAM: Alpha-L-arabinofuranosidase B (ABFB); Dockerin type I repeat; Glycosyl hydrolases family 43.
 
  
 0.690
AEV69020.1
PFAM: Alpha-L-arabinofuranosidase C-terminus.
 
  
 0.658
AEV69013.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat.
       0.534
AEV66869.1
Alcohol dehydrogenase, class IV; PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.525
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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