STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69018.1Beta-xylosidase; PFAM: Glycosyl hydrolases family 39. (502 aa)    
Predicted Functional Partners:
uxaC
PFAM: Glucuronate isomerase.
  
  
  0.836
AEV69020.1
PFAM: Alpha-L-arabinofuranosidase C-terminus.
 
   
 0.779
AEV69017.1
Beta-xylosidase; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
     0.743
AEV66803.1
Beta-1,4-xylanase; PFAM: Glycosyl hydrolase family 10.
  
   
 0.721
AEV68786.1
Beta-1,4-xylanase; PFAM: Glycosyl hydrolase family 10; Domain of unknown function (DUF1083); Carbohydrate binding domain.
  
   
 0.718
AEV67608.1
Alpha-glucuronidase; PFAM: Glycosyl hydrolase family 67 C-terminus; Glycosyl hydrolase family 67 middle domain; Glycosyl hydrolase family 67 N-terminus; Belongs to the glycosyl hydrolase 67 family.
 
     0.687
AEV69016.1
Beta-1,4-xylanase; PFAM: Dockerin type I repeat; Glycosyl hydrolase family 10; Carbohydrate binding module (family 6); Glycosyl hydrolases family 11; Belongs to the glycosyl hydrolase 10 (cellulase F) family.
 
   
 0.680
AEV67023.1
Beta-1,4-xylanase; PFAM: Glycosyl hydrolase family 10; Domain of unknown function (DUF1083); Carbohydrate binding domain; S-layer homology domain.
  
   
 0.679
AEV69204.1
Hypothetical protein.
  
     0.633
AEV69019.1
Hypothetical protein.
       0.588
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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