STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69061.1PFAM: Bacterial regulatory proteins, gntR family; UTRA domain. (238 aa)    
Predicted Functional Partners:
AEV69060.1
Putative ABC-type transport system, periplasmic component/surface lipoprotein; PFAM: Basic membrane protein.
 
    0.734
AEV69055.1
Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase.
 
   
 0.731
AEV67199.1
PFAM: Bacterial regulatory proteins, lacI family; Bacterial extracellular solute-binding protein; family.
 
 
 
 0.709
AEV69053.1
PFAM: BtpA family; TIGRFAM: membrane complex biogenesis protein, BtpA family.
 
    0.702
AEV69056.1
Nicotinamidase-like amidase; PFAM: Isochorismatase family.
 
    0.658
AEV67487.1
PFAM: Bacterial regulatory proteins, lacI family; family; manually curated.
  
   
 0.643
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.616
AEV69011.1
PFAM: Bacterial regulatory proteins, lacI family; family.
  
   
 0.613
AEV67187.1
PFAM: Bacterial regulatory proteins, lacI family; family.
  
   
 0.605
AEV69051.1
PFAM: Tryptophan synthase alpha chain.
 
     0.580
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.