STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69172.1Hypothetical protein; PFAM: Tetratricopeptide repeat; manually curated. (388 aa)    
Predicted Functional Partners:
AEV68564.1
Hypothetical protein; Manually curated.
  
     0.768
AEV67784.1
PFAM: Negative regulator of genetic competence (MecA).
  
     0.756
AEV70570.1
Hypothetical protein.
  
     0.749
AEV69454.1
Hypothetical protein.
  
     0.744
AEV67789.1
PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD.
  
     0.733
AEV69173.1
Folylpolyglutamate synthase/dihydrofolate synthase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase.
  
    0.731
AEV67351.1
Hypothetical protein.
  
     0.698
AEV66816.1
DnaD-like protein; PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain.
  
     0.678
AEV67860.1
HPr-related phosphotransferase system component; PFAM: PTS HPr component phosphorylation site.
  
    0.672
AEV67320.1
Sporulation/spore germination protein; PFAM: Sporulation and spore germination.
  
     0.635
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.