STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69205.1PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain. (440 aa)    
Predicted Functional Partners:
AEV67598.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
  
     0.639
AEV67118.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein.
 
    0.606
AEV67901.1
ABC-type polysaccharide transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
     0.537
AEV67902.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component.
 
    0.529
AEV68683.1
ABC-type polysaccharide transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
     0.511
AEV67903.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Domain of unknown function (DUF3502); Bacterial extracellular solute-binding protein.
 
    0.478
AEV68682.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component.
 
    0.475
AEV69204.1
Hypothetical protein.
       0.452
AEV67198.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
  
     0.401
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.