STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69216.1Hypothetical protein; PFAM: DUF218 domain. (218 aa)    
Predicted Functional Partners:
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
       0.779
AEV69013.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat.
  
     0.509
AEV68694.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat.
  
     0.502
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.502
AEV69754.1
Chitinase; PFAM: Glycosyl hydrolases family 18; Dockerin type I repeat; Belongs to the glycosyl hydrolase 18 family.
  
     0.473
obg
Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
 
 
    0.471
AEV67272.1
Hypothetical protein; PFAM: DUF218 domain.
  
     0.458
AEV69827.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat; Carbohydrate binding module (family 6).
  
     0.414
AEV68695.1
PFAM: Alpha-L-arabinofuranosidase B (ABFB).
  
     0.402
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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