STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69300.1O-glycosyl hydrolase; PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); O-Glycosyl hydrolase family 30; Belongs to the glycosyl hydrolase 30 family. (673 aa)    
Predicted Functional Partners:
sigI-4
RNA polymerase sigma-I factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.
  
  
 0.939
AEV68786.1
Beta-1,4-xylanase; PFAM: Glycosyl hydrolase family 10; Domain of unknown function (DUF1083); Carbohydrate binding domain.
 
   
 0.921
AEV69010.1
Beta-1,4-xylanase; PFAM: Bacterial Ig-like domain (group 2); Glycosyl hydrolase family 10; Domain of unknown function (DUF1083).
 
     0.769
AEV68181.1
Beta-1,4-xylanase; PFAM: Glycosyl hydrolase family 10; Carbohydrate binding domain; Domain of unknown function (DUF1083); S-layer homology domain.
 
     0.734
AEV66831.1
Beta-xylosidase; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
 0.727
AEV69301.1
PA14 domain-containing protein; PFAM: PA14 domain.
 
     0.725
AEV69204.1
Hypothetical protein.
 
     0.719
AEV67023.1
Beta-1,4-xylanase; PFAM: Glycosyl hydrolase family 10; Domain of unknown function (DUF1083); Carbohydrate binding domain; S-layer homology domain.
 
   
 0.688
AEV69573.1
PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Glycosyl hydrolase family 48.
  
   
 0.638
AEV70589.1
Cellobiohydrolase A (1,4-beta-cellobiosidase A); PFAM: Cellulose binding domain; Cohesin domain; manually curated.
  
     0.637
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.