STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69352.1Hypothetical protein; Manually curated. (461 aa)    
Predicted Functional Partners:
AEV68149.1
PFAM: Kelch motif; RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies).
  
 
 0.753
AEV67911.1
Hypothetical protein.
  
 
   0.720
scpA
Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.714
AEV68858.1
PFAM: Mycoplasma protein of unknown function, DUF285; Dockerin type I repeat.
  
 
   0.697
AEV69350.1
Hypothetical protein; Manually curated.
  
 
 0.692
AEV67709.1
Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily.
  
     0.684
AEV68148.1
PFAM: Fibronectin type III domain.
  
   
 0.684
AEV69808.1
PFAM: Cohesin domain; manually curated.
  
     0.676
AEV68408.1
PFAM: Cohesin domain.
  
     0.659
AEV68762.1
PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated protein; manually curated.
  
 
   0.657
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.