STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69376.1PFAM: Polysaccharide pyruvyl transferase. (391 aa)    
Predicted Functional Partners:
AEV69365.1
PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus.
     0.871
AEV69373.1
PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus.
     0.870
AEV67629.1
Ni,Fe-hydrogenase I large subunit; PFAM: Nickel-dependent hydrogenase.
  
 
 0.785
AEV66774.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
  
 
 0.754
AEV69377.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
       0.729
AEV69375.1
PFAM: Glycosyl transferase family 2.
     0.547
AEV69378.1
PFAM: Transcription termination factor nusG.
       0.412
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.