STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69390.1Hypothetical protein; PFAM: PRC-barrel domain. (179 aa)    
Predicted Functional Partners:
AEV69389.1
Hypothetical protein.
  
    0.717
AEV68135.1
PFAM: Protein of unknown function (DUF2953); manually curated.
  
     0.678
AEV70422.1
PFAM: YtxC-like family; TIGRFAM: putative sporulation protein YtxC.
  
     0.666
AEV67818.1
Hypothetical protein.
  
    0.643
AEV68663.1
PFAM: Protein of unknown function (DUF322).
  
     0.611
AEV67136.1
Putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain; PFAM: Ribbon-helix-helix protein, copG family.
  
     0.564
AEV68667.1
PFAM: Stage III sporulation protein AF (Spore_III_AF); TIGRFAM: stage III sporulation protein AF; manually curated.
  
     0.559
AEV66873.1
Hypothetical protein.
  
     0.520
AEV68115.1
PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M.
  
     0.520
AEV69736.1
PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease).
  
     0.491
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.