STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69402.1Flp pilus assembly protein, ATPase CpaF; PFAM: Type II/IV secretion system protein. (412 aa)    
Predicted Functional Partners:
AEV69401.1
Flp pilus assembly protein TadB; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.970
AEV69400.1
Flp pilus assembly protein TadC; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.969
AEV69403.1
PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
     0.935
AEV67151.1
Hypothetical protein.
 
  
 0.873
AEV67152.1
Flp pilus assembly protein TadC; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.873
AEV67149.1
PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
  
 0.802
AEV69163.1
Flp pilus assembly protein, protease CpaA; PFAM: Type IV leader peptidase family.
 
   
 0.796
AEV68358.1
PFAM: TadE-like protein.
 
  
 0.680
AEV67155.1
Hypothetical protein.
 
     0.648
AEV67162.1
FHA domain-containing protein; PFAM: FHA domain; manually curated.
 
   
 0.621
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.