STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69413.1Putative membrane protein; PFAM: Protein of unknown function (DUF421). (237 aa)    
Predicted Functional Partners:
AEV69414.1
Hypothetical protein.
 
     0.930
AEV69739.1
PFAM: Bacillus/Clostridium GerA spore germination protein.
 
  
 0.634
AEV67815.1
PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AC.
 
  
 0.619
AEV67816.1
PFAM: Stage V sporulation protein AD (SpoVAD); TIGRFAM: stage V sporulation protein AD.
 
  
 0.587
AEV68105.1
PFAM: Bacillus/Clostridium GerA spore germination protein; manually curated.
 
  
 0.572
AEV69738.1
Germination protein, Ger(X)C family; PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family.
 
  
 0.569
AEV67817.1
PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AE.
 
  
 0.566
AEV69086.1
PFAM: Stage IV sporulation protein A (spore_IV_A); TIGRFAM: stage IV sporulation protein A.
  
     0.558
AEV67455.1
PFAM: Manganese containing catalase.
  
   
 0.539
AEV70265.1
PFAM: Sporulation protein YunB (Spo_YunB); TIGRFAM: sporulation protein YunB.
  
     0.538
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.