STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69454.1Hypothetical protein. (60 aa)    
Predicted Functional Partners:
AEV69172.1
Hypothetical protein; PFAM: Tetratricopeptide repeat; manually curated.
  
     0.744
sfsA
PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; Belongs to the SfsA family.
       0.709
AEV67789.1
PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD.
  
     0.627
AEV69455.1
PFAM: Nitroreductase family.
       0.596
AEV70570.1
Hypothetical protein.
  
     0.585
AEV67860.1
HPr-related phosphotransferase system component; PFAM: PTS HPr component phosphorylation site.
  
     0.569
AEV69451.1
DnaJ-class molecular chaperone with C-terminal Zn finger domain; PFAM: DnaJ domain; Tetratricopeptide repeat; manually curated.
 
     0.569
AEV69761.1
PFAM: L-fucose isomerase, C-terminal domain.
  
     0.538
AEV66770.1
Hypothetical protein; PFAM: Tetratricopeptide repeat; manually curated.
  
     0.510
AEV67784.1
PFAM: Negative regulator of genetic competence (MecA).
  
     0.487
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.