STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69478.1Putative transcriptional regulator with HTH domain; PFAM: Divergent AAA domain. (386 aa)    
Predicted Functional Partners:
AEV67021.1
Putative transcriptional regulator with HTH domain; PFAM: Divergent AAA domain.
 
  
 
0.932
AEV70361.1
Putative transcriptional regulator with HTH domain; PFAM: Divergent AAA domain.
  
  
 
0.926
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
     
  0.900
AEV69479.1
PFAM: Eco57I restriction endonuclease.
  
    0.753
AEV69480.1
Hypothetical protein.
       0.725
AEV66998.1
Hypothetical protein.
 
    0.633
AEV69481.1
PFAM: Domain of unknown function (DUF1788).
       0.623
AEV69482.1
PFAM: Putative inner membrane protein (DUF1819).
       0.618
AEV69477.1
PFAM: PglZ domain; TIGRFAM: TIGR02687 family protein.
  
    0.611
AEV69476.1
Hypothetical protein; PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: TIGR02688 family protein; conserved hypothetical protein.
       0.605
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.