STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69483.1Putative restriction endonuclease; PFAM: HNH endonuclease. (288 aa)    
Predicted Functional Partners:
AEV69481.1
PFAM: Domain of unknown function (DUF1788).
       0.494
AEV69482.1
PFAM: Putative inner membrane protein (DUF1819).
       0.494
AEV69480.1
Hypothetical protein.
       0.429
AEV69479.1
PFAM: Eco57I restriction endonuclease.
       0.421
AEV69478.1
Putative transcriptional regulator with HTH domain; PFAM: Divergent AAA domain.
       0.420
AEV67593.1
Topoisomerase-like C4 zinc finger-containing protein; PFAM: Topoisomerase DNA binding C4 zinc finger; manually curated.
       0.408
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.