STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69493.1Integrase family protein; PFAM: Integrase core domain. (421 aa)    
Predicted Functional Partners:
AEV69492.1
PFAM: Mu transposase, C-terminal; manually curated.
     0.989
AEV69494.1
PFAM: TnsA endonuclease N terminal; TnsA endonuclease C terminal.
 
  
 0.950
AEV66955.1
PFAM: Bacterial TniB protein.
 
 
 0.914
AEV67019.1
Hypothetical protein; Manually curated.
 
 
 0.914
AEV66953.1
PFAM: TnsA endonuclease N terminal; TnsA endonuclease C terminal.
 
  
 0.791
AEV67017.1
PFAM: TnsA endonuclease N terminal; TnsA endonuclease C terminal.
 
  
 0.791
AEV66956.1
Hypothetical protein.
 
     0.780
AEV67020.1
Hypothetical protein.
 
     0.780
AEV69491.1
Hypothetical protein.
 
     0.780
AEV66919.1
PFAM: S23 ribosomal protein.
  
     0.701
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.