STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69657.1Hypothetical protein. (359 aa)    
Predicted Functional Partners:
AEV67525.1
Hypothetical protein; Manually curated.
 
 
 0.815
AEV70393.1
Putative xylanase/chitin deacetylase; PFAM: Cellulose binding domain; Polysaccharide deacetylase; manually curated.
  
 
 0.752
AEV67167.1
Hypothetical protein; Manually curated.
  
 
 0.726
AEV69470.1
Hypothetical protein.
  
 
 0.726
AEV69662.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
   
 0.715
AEV69981.1
PFAM: Pyridoxamine 5'-phosphate oxidase.
  
     0.659
AEV68069.1
Hypothetical protein.
   
 
 0.651
AEV66770.1
Hypothetical protein; PFAM: Tetratricopeptide repeat; manually curated.
 
  
 0.613
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.
  
 
 0.609
AEV70388.1
Hypothetical protein.
  
 
 0.582
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.