STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69673.1Hypothetical protein. (324 aa)    
Predicted Functional Partners:
AEV69674.1
Hypothetical protein.
 
     0.957
AEV69675.1
Fe-S oxidoreductase; PFAM: Radical SAM superfamily; B12 binding domain.
 
     0.941
AEV69676.1
Fe-S oxidoreductase; PFAM: Radical SAM superfamily; B12 binding domain.
 
     0.892
AEV69678.1
Fe-S oxidoreductase; PFAM: Radical SAM superfamily; B12 binding domain.
 
     0.801
AEV69679.1
Fe-S oxidoreductase; PFAM: Radical SAM superfamily; B12 binding domain.
 
     0.774
AEV68364.1
PFAM: Protein of unknown function (DUF2953); manually curated.
  
     0.484
AEV67638.1
PFAM: Protein of unknown function (DUF2809).
  
     0.471
AEV69657.1
Hypothetical protein.
  
     0.464
AEV69222.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
     0.453
AEV67739.1
Hypothetical protein.
  
     0.437
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.